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fix: avoid loading UserRole members during JSON Patch apply [DHIS2-21852] - #24489

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fix-userrole-jsonpatch-lazy-members
Jul 28, 2026
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fix: avoid loading UserRole members during JSON Patch apply [DHIS2-21852]#24489
netroms merged 12 commits into
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fix-userrole-jsonpatch-lazy-members

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@netroms netroms commented Jul 17, 2026

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Summary

PATCH /api/userRoles/{uid} (JSON Patch) hydrated the entire lazy UserRole.members collection even for scalar-only patches, making a one-column update cost O(members) time and allocation. Production trace: ~4s wall / ~707 MB alloc for a role with ~320 members, where the useful work was one UPDATE userrole.

Root cause

JsonPatchManager.apply serializes the live Hibernate entity twice: valueToTree invokes every @JsonProperty getter (including UserRole.getUsers(), which iterates the lazy members set), and handleCollectionUpdates then re-invokes every schema collection getter. The serialized users data is thrown away: UserRole has no setUsers, and the metadata importer ignores non-owner properties on UPDATE.

Fix

Skip collection properties that are non-owner and not referenced by any patch path, in both serialization passes:

  • valueToTree uses a per-call mapper copy with a @JsonFilter mixin bound to the entity class only (excluded getters are never invoked; nested objects serialize unchanged; fast path when nothing is excluded).
  • handleCollectionUpdates skips excluded properties before safeInvoke.

Owner collections (e.g. authorities) always stay serialized, since omitting them would clear them on import UPDATE. Non-owner collections referenced by patch paths behave exactly as before. This also covers other fat inverse collections (e.g. UserGroup members) without per-entity special cases.

Performance

Ran via the performance-tests-compare workflow on the self-hosted performance runner: platform-perf DB (~250k users), baseline dhis2/core-dev:latest vs candidate dhis2/core-pr:24489 (this PR's rebased HEAD, 8b977fcdb2a, includes the JsonPatchFilterMixin rework from review), PATCH replace /description, Gatling sequential, 10 iterations:

Role size baseline p50 baseline p95 candidate p50 candidate p95
0 members 39 ms 45 ms 30 ms 37 ms
83,334 members 16,908 ms 17,304 ms 29 ms 33 ms

Candidate latency is independent of membership size (~99.8% faster / ~583x at 83k members). GET (control) unaffected. SQL statement log confirms the userrolemembers hydrate query is gone and membership rows are unchanged after PATCH.

Testing

  • JsonPatchManagerTest: new invariant test asserting Hibernate.isInitialized(role.getMembers()) stays false after a scalar patch apply; owner-collection (authorities) preservation; /users-path parity. 13/13 green.
  • UserControllerTest: PATCH description on a role with users returns 200, description updated, users retained on GET.
  • New UserRolesPerformanceTest Gatling simulation (used for the numbers above; no calibrated thresholds yet, asserts 100% success).

JIRA: DHIS2-21852

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I don't like how the mechanics of the filtering work. We have a constant hard coded into a jackson mapping filter as well as into a @JsonFilter annotation on a mixin thing. Way to complicated and entangled to be flexible or extendable for other cases. I think we should keep this simple and just hard code this as explicit and hard-coded as we can make it ideally just being in one place.

As I understand this approach it also means you cannot patch the excluded property even if targeted explicitly. If that is the case maybe we should throw an exception if the user request does attempt such a patch?

@david-mackessy

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  • great to have a perf test cover this 👍
  • i'd be a little worried about unknown side effects of this given it applies system-wide for all PATCHes
  • the outcome seems good & this could have benefits in other unknown n+1s too
  • does PUT in UserRoleController have the same issue?

@netroms
netroms marked this pull request as draft July 21, 2026 07:52
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netroms commented Jul 23, 2026

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Follow-up on system-wide PATCH side effects

Thanks — valid concern given this sits in JsonPatchManager used by all metadata PATCH.

Extra coverage added

  • Integration (JsonPatchManagerTest): scalar apply must not initialize inverse collections on OrganisationUnit (children/users), User (userGroups), and UserGroup.managedByGroups; owner collections still present (User.userRoles, UserGroup.users, DataElementGroup.members, existing UserRole.authorities).
  • Web-api (JsonPatchSideEffectControllerTest): HTTP PATCH name/firstName on OU / UserGroup / User leaves children/users/userGroups unchanged; PATCH replace /users on UserRole does not drop membership.

Skip rules (unchanged for collections; non-persisted props)

  • Collections: only isCollection && !isOwner && path not referenced is omitted. Owner collections always serialize (omitting them would clear on import UPDATE). Note UserGroup.users is owner, so it is not skipped; the new test asserts members still round-trip on name PATCH.
  • Non-persisted properties (e.g. OrganisationUnit.leaf) are also omitted when unreferenced, because derived getters can force-init inverse collections and defeat the lazy-member skip.

PUT /userRoles/{uid} — different code path
PUT does not go through JsonPatchManager. AbstractCrudController.putJsonObject deserializes the request body and calls importMetadata(UPDATE) only. The lazy members hydrate bug was PATCH-only (doPatchjsonPatchManager.applyvalueToTree / handleCollectionUpdates). UserRoleController does not override PUT/PATCH.

netroms added a commit that referenced this pull request Jul 23, 2026
Spec for multi-entity integration + web-api coverage answering
David's system-wide PATCH concern on PR #24489 / DHIS2-21852.
netroms added a commit that referenced this pull request Jul 23, 2026
Task breakdown for multi-entity integration + web-api coverage
on PR #24489 / DHIS2-21852.
@netroms
netroms force-pushed the fix-userrole-jsonpatch-lazy-members branch from b55c194 to f12cfba Compare July 23, 2026 14:24
jason-p-pickering added a commit that referenced this pull request Jul 23, 2026
…FilterService pattern [DHIS2-21852]

Addresses review feedback on #24489 (Jan Bernitt): the per-call `.addMixIn(realClass, ...)` +
inline mixin + filter-provider wiring in JsonPatchManager.apply() was rebuilt from scratch on every
call and didn't follow any existing convention. Reworks it to mirror the codebase's established
pattern for the same underlying problem -- skipping a getter during Jackson serialization based on
per-call criteria, without invoking it -- already used for the `?fields=` GET path
(org.hisp.dhis.fieldfiltering.FieldFilterService/FieldFilterMixin).

- New `JsonPatchFilterMixin` (`@JsonFilter`) and `JsonPatchExcludedPropertyFilter`
  (`SimpleBeanPropertyFilter`), shaped like `FieldFilterMixin`/`FieldFilterSimpleBeanPropertyFilter`.
- `JsonPatchManager` caches one mixin-bound `ObjectMapper` copy per entity type
  (`ConcurrentHashMap<Class<?>, ObjectMapper>`, built lazily via `computeIfAbsent`) instead of
  rebuilding the mixin binding on every `apply()` call. `findExcludableNonOwnerCollections` (the
  exclusion rule itself) is unchanged -- it was already schema-driven and generic.
- The mixin is scoped per-`realClass`, not bound to `Object.class` globally: `FieldFilterMixin`'s own
  filter is path-aware, so a global binding is safe for it, but `JsonPatchExcludedPropertyFilter`
  matches by property name only. A global binding was tried first and found, in review, to silently
  strip `Sharing.users`/`Sharing.userGroups` (present on every `IdentifiableObject`) whenever a
  same-named top-level collection was excluded, e.g. on a scalar UserRole PATCH. Scoping per-class
  makes that cross-type collision impossible. Regression test:
  `testUserRoleSharingUsersSurviveScalarPatch`.
- Answers Jan's second question (should an explicit patch to an excluded property throw?): no --
  `findExcludableNonOwnerCollections` already un-excludes a property referenced by a patch path, so
  it falls back to full (slower, correct) hydration rather than being silently dropped. Replaced the
  previous `testUserRoleUsersPathPatchDoesNotThrow` (asserted only `assertNotNull`, would pass either
  way) with `testUserRoleUsersPathPatchFallsBackToFullHydration`, which asserts
  `Hibernate.isInitialized(...)` actually flips to `true`, mutation-tested against the fallback logic.

No functional change to PATCH behavior beyond fixing the Object.class regression introduced and
caught within this same review cycle (never released). All existing JsonPatchManagerTest coverage
(14 tests) plus the new JsonPatchExcludedPropertyFilterTest (2 tests) pass; UserControllerTest (52
tests, dhis-test-web-api) unaffected.

Co-Authored-By: Claude Sonnet 5 <noreply@anthropic.com>
jason-p-pickering added a commit that referenced this pull request Jul 23, 2026
…FilterService pattern [DHIS2-21852]

Addresses review feedback on #24489 (Jan Bernitt): the per-call `.addMixIn(realClass, ...)` +
inline mixin + filter-provider wiring in JsonPatchManager.apply() was rebuilt from scratch on every
call and didn't follow any existing convention. Reworks it to mirror the codebase's established
pattern for the same underlying problem -- skipping a getter during Jackson serialization based on
per-call criteria, without invoking it -- already used for the `?fields=` GET path
(org.hisp.dhis.fieldfiltering.FieldFilterService/FieldFilterMixin).

- New `JsonPatchFilterMixin` (`@JsonFilter`) and `JsonPatchExcludedPropertyFilter`
  (`SimpleBeanPropertyFilter`), shaped like `FieldFilterMixin`/`FieldFilterSimpleBeanPropertyFilter`.
- `JsonPatchManager` caches one mixin-bound `ObjectMapper` copy per entity type
  (`ConcurrentHashMap<Class<?>, ObjectMapper>`, built lazily via `computeIfAbsent`) instead of
  rebuilding the mixin binding on every `apply()` call. `findExcludableNonOwnerCollections` (the
  exclusion rule itself) is unchanged -- it was already schema-driven and generic.
- The mixin is scoped per-`realClass`, not bound to `Object.class` globally: `FieldFilterMixin`'s own
  filter is path-aware, so a global binding is safe for it, but `JsonPatchExcludedPropertyFilter`
  matches by property name only. A global binding was tried first and found, in review, to silently
  strip `Sharing.users`/`Sharing.userGroups` (present on every `IdentifiableObject`) whenever a
  same-named top-level collection was excluded, e.g. on a scalar UserRole PATCH. Scoping per-class
  makes that cross-type collision impossible. Regression test:
  `testUserRoleSharingUsersSurviveScalarPatch`.
- Answers Jan's second question (should an explicit patch to an excluded property throw?): no --
  `findExcludableNonOwnerCollections` already un-excludes a property referenced by a patch path, so
  it falls back to full (slower, correct) hydration rather than being silently dropped. Replaced the
  previous `testUserRoleUsersPathPatchDoesNotThrow` (asserted only `assertNotNull`, would pass either
  way) with `testUserRoleUsersPathPatchFallsBackToFullHydration`, which asserts
  `Hibernate.isInitialized(...)` actually flips to `true`, mutation-tested against the fallback logic.

No functional change to PATCH behavior beyond fixing the Object.class regression introduced and
caught within this same review cycle (never released). All existing JsonPatchManagerTest coverage
(14 tests) plus the new JsonPatchExcludedPropertyFilterTest (2 tests) pass; UserControllerTest (52
tests, dhis-test-web-api) unaffected.

Co-Authored-By: Claude Sonnet 5 <noreply@anthropic.com>
jason-p-pickering added a commit that referenced this pull request Jul 23, 2026
…FilterService pattern [DHIS2-21852]

Addresses review feedback on #24489 (Jan Bernitt): the per-call `.addMixIn(realClass, ...)` +
inline mixin + filter-provider wiring in JsonPatchManager.apply() was rebuilt from scratch on every
call and didn't follow any existing convention. Reworks it to mirror the codebase's established
pattern for the same underlying problem -- skipping a getter during Jackson serialization based on
per-call criteria, without invoking it -- already used for the `?fields=` GET path
(org.hisp.dhis.fieldfiltering.FieldFilterService/FieldFilterMixin).

- New `JsonPatchFilterMixin` (`@JsonFilter`) and `JsonPatchExcludedPropertyFilter`
  (`SimpleBeanPropertyFilter`), shaped like `FieldFilterMixin`/`FieldFilterSimpleBeanPropertyFilter`.
- `JsonPatchManager` caches one mixin-bound `ObjectMapper` copy per entity type
  (`ConcurrentHashMap<Class<?>, ObjectMapper>`, built lazily via `computeIfAbsent`) instead of
  rebuilding the mixin binding on every `apply()` call. `findExcludableNonOwnerCollections` (the
  exclusion rule itself) is unchanged -- it was already schema-driven and generic.
- The mixin is scoped per-`realClass`, not bound to `Object.class` globally: `FieldFilterMixin`'s own
  filter is path-aware, so a global binding is safe for it, but `JsonPatchExcludedPropertyFilter`
  matches by property name only. A global binding was tried first and found, in review, to silently
  strip `Sharing.users`/`Sharing.userGroups` (present on every `IdentifiableObject`) whenever a
  same-named top-level collection was excluded, e.g. on a scalar UserRole PATCH. Scoping per-class
  makes that cross-type collision impossible. Regression test:
  `testUserRoleSharingUsersSurviveScalarPatch`.
- Answers Jan's second question (should an explicit patch to an excluded property throw?): no --
  `findExcludableNonOwnerCollections` already un-excludes a property referenced by a patch path, so
  it falls back to full (slower, correct) hydration rather than being silently dropped. Replaced the
  previous `testUserRoleUsersPathPatchDoesNotThrow` (asserted only `assertNotNull`, would pass either
  way) with `testUserRoleUsersPathPatchFallsBackToFullHydration`, which asserts
  `Hibernate.isInitialized(...)` actually flips to `true`, mutation-tested against the fallback logic.

No functional change to PATCH behavior beyond fixing the Object.class regression introduced and
caught within this same review cycle (never released). All existing JsonPatchManagerTest coverage
(14 tests) plus the new JsonPatchExcludedPropertyFilterTest (2 tests) pass; UserControllerTest (52
tests, dhis-test-web-api) unaffected.

Co-Authored-By: Claude Sonnet 5 <noreply@anthropic.com>
@netroms
netroms marked this pull request as ready for review July 24, 2026 10:53
jason-p-pickering added a commit that referenced this pull request Jul 26, 2026
…FilterService pattern [DHIS2-21852]

Addresses review feedback on #24489 (Jan Bernitt): the per-call `.addMixIn(realClass, ...)` +
inline mixin + filter-provider wiring in JsonPatchManager.apply() was rebuilt from scratch on every
call and didn't follow any existing convention. Reworks it to mirror the codebase's established
pattern for the same underlying problem -- skipping a getter during Jackson serialization based on
per-call criteria, without invoking it -- already used for the `?fields=` GET path
(org.hisp.dhis.fieldfiltering.FieldFilterService/FieldFilterMixin).

- New `JsonPatchFilterMixin` (`@JsonFilter`) and `JsonPatchExcludedPropertyFilter`
  (`SimpleBeanPropertyFilter`), shaped like `FieldFilterMixin`/`FieldFilterSimpleBeanPropertyFilter`.
- `JsonPatchManager` caches one mixin-bound `ObjectMapper` copy per entity type
  (`ConcurrentHashMap<Class<?>, ObjectMapper>`, built lazily via `computeIfAbsent`) instead of
  rebuilding the mixin binding on every `apply()` call. `findExcludableNonOwnerCollections` (the
  exclusion rule itself) is unchanged -- it was already schema-driven and generic.
- The mixin is scoped per-`realClass`, not bound to `Object.class` globally: `FieldFilterMixin`'s own
  filter is path-aware, so a global binding is safe for it, but `JsonPatchExcludedPropertyFilter`
  matches by property name only. A global binding was tried first and found, in review, to silently
  strip `Sharing.users`/`Sharing.userGroups` (present on every `IdentifiableObject`) whenever a
  same-named top-level collection was excluded, e.g. on a scalar UserRole PATCH. Scoping per-class
  makes that cross-type collision impossible. Regression test:
  `testUserRoleSharingUsersSurviveScalarPatch`.
- Answers Jan's second question (should an explicit patch to an excluded property throw?): no --
  `findExcludableNonOwnerCollections` already un-excludes a property referenced by a patch path, so
  it falls back to full (slower, correct) hydration rather than being silently dropped. Replaced the
  previous `testUserRoleUsersPathPatchDoesNotThrow` (asserted only `assertNotNull`, would pass either
  way) with `testUserRoleUsersPathPatchFallsBackToFullHydration`, which asserts
  `Hibernate.isInitialized(...)` actually flips to `true`, mutation-tested against the fallback logic.

No functional change to PATCH behavior beyond fixing the Object.class regression introduced and
caught within this same review cycle (never released). All existing JsonPatchManagerTest coverage
(14 tests) plus the new JsonPatchExcludedPropertyFilterTest (2 tests) pass; UserControllerTest (52
tests, dhis-test-web-api) unaffected.

Co-Authored-By: Claude Sonnet 5 <noreply@anthropic.com>
@jason-p-pickering
jason-p-pickering force-pushed the fix-userrole-jsonpatch-lazy-members branch from 03adef3 to 8b977fc Compare July 26, 2026 06:48
jason-p-pickering added a commit that referenced this pull request Jul 26, 2026
Calibrated from the baseline/candidate A/B run on the platform-perf DB used to
recalibrate PR #24489 after the rebase onto the JsonPatchFilterMixin refactor.
PATCH scenarios share one threshold since the invariant under test is that
PATCH latency must not depend on role membership size.

Co-Authored-By: Claude Sonnet 5 <noreply@anthropic.com>
@jason-p-pickering
jason-p-pickering requested a review from jbee July 26, 2026 16:19

@jbee jbee left a comment

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I think the filter and filter mixin could be package locale or even inner classes of the manager as their function is only internal and unlikely to be reused in other contexts.

netroms and others added 11 commits July 28, 2026 01:46
JsonPatchManager converted the managed entity to a tree via valueToTree
and then re-invoked every collection getter in handleCollectionUpdates.
For UserRole, getUsers() initializes all lazy members, causing
O(members) SQL and hundreds of MB of allocation on scalar PATCHes.

Skip non-owner collection properties that no patch path references, in
both serialization passes. Non-owner collections are ignored by
metadata import UPDATE, so omitting them is semantically free; owner
collections always stay in the tree (omitting them would clear them on
import). Non-owner collections referenced by patch paths keep today's
behavior.
Gatling simulation patching a scalar field on an empty control role and
on a large-membership role (platform-perf DB), making the O(members)
PATCH regression visible. No calibrated thresholds yet; asserts 100%
success only.
OrganisationUnit.leaf calls children.isEmpty(), which initializes the
inverse children collection even when JsonPatchManager already omits
non-owner collections. Exclude unreferenced non-persisted properties
from patch serialization so derived getters cannot force lazy loads.
…FilterService pattern [DHIS2-21852]

Addresses review feedback on #24489 (Jan Bernitt): the per-call `.addMixIn(realClass, ...)` +
inline mixin + filter-provider wiring in JsonPatchManager.apply() was rebuilt from scratch on every
call and didn't follow any existing convention. Reworks it to mirror the codebase's established
pattern for the same underlying problem -- skipping a getter during Jackson serialization based on
per-call criteria, without invoking it -- already used for the `?fields=` GET path
(org.hisp.dhis.fieldfiltering.FieldFilterService/FieldFilterMixin).

- New `JsonPatchFilterMixin` (`@JsonFilter`) and `JsonPatchExcludedPropertyFilter`
  (`SimpleBeanPropertyFilter`), shaped like `FieldFilterMixin`/`FieldFilterSimpleBeanPropertyFilter`.
- `JsonPatchManager` caches one mixin-bound `ObjectMapper` copy per entity type
  (`ConcurrentHashMap<Class<?>, ObjectMapper>`, built lazily via `computeIfAbsent`) instead of
  rebuilding the mixin binding on every `apply()` call. `findExcludableNonOwnerCollections` (the
  exclusion rule itself) is unchanged -- it was already schema-driven and generic.
- The mixin is scoped per-`realClass`, not bound to `Object.class` globally: `FieldFilterMixin`'s own
  filter is path-aware, so a global binding is safe for it, but `JsonPatchExcludedPropertyFilter`
  matches by property name only. A global binding was tried first and found, in review, to silently
  strip `Sharing.users`/`Sharing.userGroups` (present on every `IdentifiableObject`) whenever a
  same-named top-level collection was excluded, e.g. on a scalar UserRole PATCH. Scoping per-class
  makes that cross-type collision impossible. Regression test:
  `testUserRoleSharingUsersSurviveScalarPatch`.
- Answers Jan's second question (should an explicit patch to an excluded property throw?): no --
  `findExcludableNonOwnerCollections` already un-excludes a property referenced by a patch path, so
  it falls back to full (slower, correct) hydration rather than being silently dropped. Replaced the
  previous `testUserRoleUsersPathPatchDoesNotThrow` (asserted only `assertNotNull`, would pass either
  way) with `testUserRoleUsersPathPatchFallsBackToFullHydration`, which asserts
  `Hibernate.isInitialized(...)` actually flips to `true`, mutation-tested against the fallback logic.

No functional change to PATCH behavior beyond fixing the Object.class regression introduced and
caught within this same review cycle (never released). All existing JsonPatchManagerTest coverage
(14 tests) plus the new JsonPatchExcludedPropertyFilterTest (2 tests) pass; UserControllerTest (52
tests, dhis-test-web-api) unaffected.

Co-Authored-By: Claude Sonnet 5 <noreply@anthropic.com>
Calibrated from the baseline/candidate A/B run on the platform-perf DB used to
recalibrate PR #24489 after the rebase onto the JsonPatchFilterMixin refactor.
PATCH scenarios share one threshold since the invariant under test is that
PATCH latency must not depend on role membership size.

Co-Authored-By: Claude Sonnet 5 <noreply@anthropic.com>
@netroms
netroms force-pushed the fix-userrole-jsonpatch-lazy-members branch from a77739b to fbe6983 Compare July 27, 2026 17:46
Per review: both are internal to JsonPatchManager and not reused outside
the package, so drop public visibility.
@sonarqubecloud

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@codecov

codecov Bot commented Jul 27, 2026

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Codecov Report

❌ Patch coverage is 81.39535% with 8 lines in your changes missing coverage. Please review.
✅ Project coverage is 69.53%. Comparing base (e4a9688) to head (3b9d8ec).
⚠️ Report is 38 commits behind head on master.

Files with missing lines Patch % Lines
...his/jsonpatch/JsonPatchExcludedPropertyFilter.java 60.00% 3 Missing and 1 partial ⚠️
...java/org/hisp/dhis/jsonpatch/JsonPatchManager.java 87.87% 1 Missing and 3 partials ⚠️
Additional details and impacted files
@@              Coverage Diff              @@
##             master   #24489       +/-   ##
=============================================
+ Coverage     35.47%   69.53%   +34.06%     
- Complexity      533      726      +193     
=============================================
  Files          3713     3714        +1     
  Lines        143929   144340      +411     
  Branches      16776    16839       +63     
=============================================
+ Hits          51064   100374    +49310     
+ Misses        88660    36234    -52426     
- Partials       4205     7732     +3527     
Flag Coverage Δ
integration 50.14% <81.39%> (?)
integration-h2 28.10% <81.39%> (?)
unit 35.55% <13.95%> (+0.07%) ⬆️

Flags with carried forward coverage won't be shown. Click here to find out more.

Files with missing lines Coverage Δ
...his/jsonpatch/JsonPatchExcludedPropertyFilter.java 60.00% <60.00%> (ø)
...java/org/hisp/dhis/jsonpatch/JsonPatchManager.java 91.89% <87.87%> (+91.89%) ⬆️

... and 2166 files with indirect coverage changes


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@netroms
netroms merged commit 5f6a524 into master Jul 28, 2026
27 checks passed
@netroms
netroms deleted the fix-userrole-jsonpatch-lazy-members branch July 28, 2026 06:51
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4 participants